Project

COVID WarRoom

COVID WarRoom has been designed to aid in the development of re-opening strategies as we begin the re-opening process. Presently, COVID WarRoom allows the user to select a location for analysis, and then define the parameters by using one of our four predefined Social Distancing models: Linear Auto-SD, Linear Default-SD, Quadratic Auto-SD, and Quadratic Default-SD.

RPI StudySafe

A Web application designed for RPI students to navigate campus safely in the wake of the COVID-19 crisis. It is built on the R Shiny application framework, written primarily in R, with some UI functionality written in Javascript and HTML. The app informs students on how many people are in a given building on campus and gives recommendations based on past data.

Data INCITE

The Rensselaer Data INCITE pipeline for undergraduate data science education consists of an early data analytics course followed by applied data science research experiences on real-world problems. Data INCITE results in data science skills and prompts students to pursue further coursework and careers in data science.

COVID Twitter NLP

In this exploratory study, we scrutinize a database of over one million tweets collected from March to July 2020 to illustrate public attitudes towards mask usage during the COVID-19 pandemic. We employ natural language processing, clustering and sentiment analysis techniques to organize tweets relating to mask-wearing into high-level themes, then relay narratives for each theme using automatic text summarization. In recent months, a body of literature has highlighted the robustness of trends in online activity as proxies for the sociological impact of COVID-19.

COVID Back-to-School

To control spread of COVID, we must implement social distancing measures. Rather than arbitrarily implementing measures against COVID spread, we have built a tool that gives you a quantitative approach to controlling spread. COVID Back-to-School is a tool for generating actionable information on how to reopen schools (elementary, secondary, boarding), universities, workplaces, etc. For different settings of the social distancing "knobs,: you can find out how the infection will spread in your school/university/organization. You can tune the knobs until the spread is a tolerable level for you. The settings for these knobs will then tell you what social distancing protocols you need in place to accomplish that level of tolerable spread.

COVIDMINDER

COVIDMINDER reveals the regional disparities in outcomes, determinants, and mediations of the COVID-19 pandemic. Outcomes are the direct effects of COVID-19. Social and Economic Determinants are pre-existing risk factors that impact COVID-19 outcomes. Mediations are resources and programs used to combat the pandemic. COVIDMINDER analysis and visualizations are by students and staff of The Rensselaer Institute for Data Exploration and Applications at Rensselaer Polytechnic Institute with generous support from the United Health Foundation. COVIDMINDER is an open source project implemented on the R Shiny platform.

Privacy-Preserving Synthetic Health Data for Research and Education

The inability to share private health data can severely stifle research and innovation in health informatics. Studies based on unpublished electronic medical record (EMR) data cannot be reproduced, thus future researchers are not able to use them to develop and compare new research. This contributes to the reproduciblity crisis in biomedical research. Making open data available for research can spur innovation and research. The public Medical Information Mart for Intensive Care datasets, MIMIC-II and MIMIC-III, are widely used with over 2000 citations reported in Google Scholar in March 2020. But since MIMIC-II and MIMIC-III focus on Intensive Care Unit patients in Boston hospitals, the resulting research may be biased and have limited generalization. The cost and time required, along with re-identification risk concerns make de-identification only a partial solution to this problem.

MORTALITYMINDER

MortalityMinder (MM) is a web-based visualization tool that enables interactive exploration of social, economic and geographic factors associated with premature mortality among mid-life adults ages 25-64 across the United States. Using authoritative data from the CDC and other sources, MM is a freely available, publicly-accessible, open source, and easily maintained tool. The goal of MortalityMinder (MM) is to enable healthcare researchers, providers, payers, and policy makers to gain actionable insights into how, where, and why midlife mortality rates are rising in the United States (US). It is designed to help healthcare payers, providers and policymakers at the national, state, county and community levels identify and address unmet healthcare needs, healthcare costs, and healthcare utilization.

Health INCITE

The Rensselaer Health Informatics Challenges in Technology Education (INCITE) Pipeline recruits and prepares students at Rensselaer and worldwide to be data scientists in healthcare using early data analytics courses and experiential research projects centered on real-world health challenges. With the advent of electronic healthcare records (EHR) and precision medicine, healthcare increasingly relies on health informatics (HI), the philosophy and tools of data science (DS) and their application in healthcare. Rensselaer Health INCITE is a innovative, replicable program that directly expands the health informatics workforce pipeline at the early undergraduate level for students at RPI and worldwide.